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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CRTAM, cytotoxic and regulatory T cell molecule
Sequence ID:NM_019604
Entrez Gene ID:56253
Ensembl ID:ENSG00000109943

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 122733109 - 122743345

NM_019604 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
146122709254122709299
47193122720775122720921
194346122722400122722552
347490122724650122724793
491652122726402122726563
653733122733171122733251
734817122735343122735426
818964122738116122738262
9651051122738720122738806
10522420122741976122743344

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30418882Full LengthBC070266cytotoxic and regulatory T cell molecule

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062550  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019604 NP_062550 O95727 ig
V-set
C2-set_2

Related Sequences

 
mRNAGenPeptSwissProt
AF001622 AAC80267 O95727
BC070266 AAH70266 O95727
HQ447587 ADQ32073  
AB209830 BAD93067 O95727
AK313578 BAG36349 B2R902
AK293470 BAG56963 B4DE52

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CRTAM NP_062550 M.musculus Crtam 54698 Gene Info NP_062338 73
R.norvegicus Crtam 300649   NP_001100283 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)