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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SACS, spastic ataxia of Charlevoix-Saguenay (sacsin)
Sequence ID:NM_014363
RefSeqGene ID:NG_012342
Entrez Gene ID:26278
Ensembl ID:ENSG00000151835

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 23902971 - 23907289

NM_014363 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1128652390296423915828
12866129572392792323928014
12958144462392865723930145
14447145932393247323932619
14594147052393930423939415
14706147912394254023942625
14792148792394521623945303
14880150302394925723949407
15031155512398535823985878
15552156392400775324007840

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5302298IncompleteBC039418spastic ataxia of Charlevoix-Saguenay (sacsin)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014363 NP_055178 Q9NZJ4  

Related Sequences

 
mRNAGenPeptSwissProt
AB018273 BAA34450 Q9NZJ4
AK090599 BAC03486 Q9NZJ4
BX640926 CAE45964 Q9NZJ4
CR749427 CAH18265 Q9NZJ4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SACS NP_055178 R.norvegicus Sacs 305940   XP_224256 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)