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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. B4GALNT1, beta-1,4-N-acetyl-galactosaminyl transferase 1
Sequence ID:NM_001478
Entrez Gene ID:2583
Ensembl ID:ENSG00000135454

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 58017192 - 58026934

 Exon Info From UCSC:
NM_001478

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5176204Full LengthBC029828beta-1,4-N-acetyl-galactosaminyl transferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001469  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001478 NP_001469 Q00973 EC 2.4.1.92 Glycos_transf_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M83651 AAA35516 Q00973 EC 2.4.1.92
BC029828 AAH29828 Q8N636  
JF432494 ADZ15711    
HQ860786 AEJ36341 F8TDK4  
HQ860787 AEJ36342 F8TDK5  
HQ860788 AEJ36343 F8TDK6  
HQ860789 AEJ36344 F8TDK7  
AB209460 BAD92697 Q59FK0  
AK289690 BAF82379 A8K0X5  
AK293432 BAG56937 B4DE26  
AK299845 BAG61707 B4DSP5  
AK302503 BAH13729 B7Z7U3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens B4GALNT1 NP_001469 R.norvegicus B4galnt1 64828   NP_074051 88
M.musculus B4galnt1 14421 Gene Info NP_032106 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)