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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. PKD2L1, polycystic kidney disease 2-like 1
Sequence ID:NM_001253837
Entrez Gene ID:9033
Ensembl ID:ENSG00000107593

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 102047902 - 102089735

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5200440Full LengthBC025665polycystic kidney disease 2-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057196  

Protein Infomation

NM_001253837 NP_001240766    
NM_016112 NP_057196 Q9P0L9 PKD_channel

Related Sequences

AF094827 AAD08695 Q9P0L9
AF092170 AAD16101 O95814
AF073481 AAD41638 Q9P0L9
AF053316 AAD51859 Q9P0L9
BC025665 AAH25665 Q9P0L9
DQ084244 AAZ31363 Q1L4F0
DQ891554 ABM82480  
DQ894741 ABM85667  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens PKD2L1 NP_057196 M.musculus Pkd2l1 329064 Gene Info NP_852087 88
R.norvegicus Pkd2l1 293937   NP_001099822 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)