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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARHGDIA, Rho GDP dissociation inhibitor (GDI) alpha
Sequence ID:NM_001185077
NM_001185078
NM_004309
Entrez Gene ID:396
Ensembl ID:ENSG00000141522

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 79826751 - 79827806

 Exon Info From UCSC:
NM_001185077
NM_001185078
NM_004309

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961556Full LengthBC005851Rho GDP dissociation inhibitor (GDI) alpha
2961556Full LengthBC005875Rho GDP dissociation inhibitor (GDI) alpha
2966760Full LengthBC008701Rho GDP dissociation inhibitor (GDI) alpha
3027721Full LengthBC024258Rho GDP dissociation inhibitor (GDI) alpha
3911525Full LengthBC016031Rho GDP dissociation inhibitor (GDI) alpha
3935956Full LengthBC009759Rho GDP dissociation inhibitor (GDI) alpha
4764249Full LengthBC027730Rho GDP dissociation inhibitor (GDI) alpha
4867857Full LengthBC016185Rho GDP dissociation inhibitor (GDI) alpha
6074977Full LengthBC075827Rho GDP dissociation inhibitor (GDI) alpha
6162284Full LengthBC106044Rho GDP dissociation inhibitor (GDI) alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004300  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001185077 NP_001172006    
NM_001185078 NP_001172007    
NM_004309 NP_004300 P52565 Rho_GDI

Related Sequences

 
mRNAGenPeptSwissProt
M97579 AAA36566 P52565
BC005851 AAH05851 P52565
BC005875 AAH05875 P52565
BC008701 AAH08701 P52565
BC009759 AAH09759 P52565
BC016031 AAH16031 P52565
BC016185 AAH16185 P52565
BC024258 AAH24258 P52565
BC027730 AAH27730 P52565
BC075827 AAH75827 P52565
BC106044 AAI06045 P52565
AF498926 AAM21074 P52565
BT006884 AAP35530 P52565
DQ891117 ABM82043  
DQ894296 ABM85222  
D13989 BAA03096 P52565
AK312347 BAG35268 P52565
AK293147 BAG56694 J3QW41
AK300816 BAG62471 A8MXW0
X69550 CAA49281 P52565
CR456777 CAG33058 P52565

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARHGDIA NP_001172006 R.norvegicus Arhgdia 360678   NP_001007006 97
M.musculus Arhgdia 192662 Gene Info NP_598557 97
A.gambiae AgaP_AGAP012168 1280517   XP_320365 55
D.melanogaster RhoGDI 40179   NP_649162 52
N.crassa NCU06561 3878391   XP_962268 43
S.cerevisiae RDI1 851420   NP_010146 41
C.elegans rhi-1 180721   NP_508774 40
A.thaliana SCN1 819979   NP_187445 39
S.pombe SPAC6F12.06 2543214   NP_593292 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)