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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TRPC6, transient receptor potential cation channel, subfamily C, member 6
Sequence ID:NM_004621
RefSeqGene ID:NG_011476
Entrez Gene ID:7225
Ensembl ID:ENSG00000137672

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
GLOMERULOSCLEROSIS, FOCAL SEGMENTAL, 2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 101323420 - 101454251

 Exon Info From UCSC:
NM_004621

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939503Full LengthBC093658transient receptor potential cation channel, subfamily C, member 6
7939505Full LengthBC093660transient receptor potential cation channel, subfamily C, member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004612  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004621 NP_004612 Q9Y210 Ank
Ion_trans
TRP_2

Related Sequences

 
mRNAGenPeptSwissProt
AF080394 AAC63289 Q9Y210
BC093658 AAH93658 Q9Y210
BC093660 AAH93660 Q9Y210
AK027769 BAG51375 B3KNL3
AJ006276 CAA06943 Q9Y210
AJ271066 CAC01684 Q9Y210
AJ271067 CAC01685 Q9Y210
AJ271068 CAC01686 Q9Y210
AJ007018 CAC06090 Q9Y210

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRPC6 NP_004612 M.musculus Trpc6 22068 Gene Info NP_038866 94
R.norvegicus Trpc6 89823   NP_446011 94
C.elegans trp-1 176202   NP_001040889 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)