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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TAF1, TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa
Sequence ID:NM_004606
NM_138923
RefSeqGene ID:NG_012771
Entrez Gene ID:6872
Ensembl ID:ENSG00000147133

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DYSTONIA-PARKINSONISM, X-LINKED 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 70608168 - 70685851

 Exon Info From UCSC:
NM_004606
NM_138923

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069121Full LengthBC172427TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620278  NP_004597  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_004606 NP_004597     Bromodomain
NM_138923 NP_620278 P21675 EC 2.7.11.1 Bromodomain

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC172427 AAI72427    
D90359 BAA14374 P21675 EC 2.7.11.1
AB209316 BAD92553 P21675 EC 2.7.11.1
AB300418 BAG15901 B1Q2X3  
X07024 CAA30073 P21675 EC 2.7.11.1
AJ549245 CAD70488 Q70T05  
AJ549246 CAD70489 Q70T04  
AJ549247 CAD70490 P21675 EC 2.7.11.1
AJ549248 CAD70491 P21675 EC 2.7.11.1
AJ549249 CAD70492 P21675 EC 2.7.11.1
AJ549250 CAD70493 P21675 EC 2.7.11.1
AJ555148 CAD87527 P21675 EC 2.7.11.1
AJ555149 CAD87528 P21675 EC 2.7.11.1
AM711892 CAM98555 A5CVC8  
AM711893 CAM98556 A5CVC9  
AM711894 CAM98557 P21675 EC 2.7.11.1
AM711895 CAM98558 A5CVD1  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TAF1 NP_004597 M.musculus Taf1 270627 Gene Info NP_001074477 96
R.norvegicus Taf1 317256   XP_228551 96
D.melanogaster Taf1 40813   NP_996160 53
A.gambiae AgaP_AGAP003882 1269482   XP_308108 51
C.elegans taf-1 173257   NP_493426 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta