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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. COMP, cartilage oligomeric matrix protein
Sequence ID:NM_000095
RefSeqGene ID:NG_007070
Entrez Gene ID:1311
Ensembl ID:ENSG00000105664

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 18893724 - 18902078

 Exon Info From UCSC:
NM_000095

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5591535Full LengthBC110847cartilage oligomeric matrix protein
40118200Full LengthBC125092cartilage oligomeric matrix protein
5176430IncompleteBC033676cartilage oligomeric matrix protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000086  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000095 NP_000086 P49747 EGF
TSP_3
TSP_C
EGF_CA

Related Sequences

 
mRNAGenPeptSwissProt
L32137 AAA57253 P49747
BC110847 AAI10848 P49747
BC125092 AAI25093 P49747
DQ893292 ABM84218  
DQ896645 ABM87644  
AK074508 BAC11031 Q8N2R4
AB086984 BAC53888 P49747
AK223216 BAD96936 Q53FR6
AK290595 BAF83284 A8K3I0
AK296586 BAG59205 B4DKJ3
AK297798 BAG60137 B4DN75
AK297814 BAG60152 B4DN90

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COMP NP_000086 M.musculus Comp 12845 Gene Info NP_057894 91
A.gambiae AgaP_AGAP002157 1269399   XP_308033 60
D.melanogaster Tsp 33941   NP_001137802 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)