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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HCRT, Hypocretin (orexin) neuropeptide precursor
Sequence ID:NM_001524
RefSeqGene ID:NG_011448
Entrez Gene ID:3060
Ensembl ID:ENSG00000161610

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 40336077 - 40337470

NM_001524 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14694033607740336545
4705774033736240337469

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40080741BC111915hypocretin (orexin) neuropeptide precursor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001515  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001524 NP_001515 O43612 Orexin

Related Sequences

 
mRNAGenPeptSwissProt
AF041240 AAC39600 O43612
BC111915 AAI11916  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HCRT NP_001515 R.norvegicus Hcrt 25723   NP_037311 84
M.musculus Hcrt 15171 Gene Info NP_034540 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)