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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CHST3, Carbohydrate (chondroitin 6) sulfotransferase 3
Sequence ID:NM_004273
RefSeqGene ID:NG_012635
Entrez Gene ID:9469
Ensembl ID:ENSG00000122863

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 73724122 - 73769041

NM_004273 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13337372411973724451
3345807376549373765739
58169727376692973773320

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939535Full LengthBC093690carbohydrate (chondroitin 6) sulfotransferase 3
8143859Full LengthBC104856carbohydrate (chondroitin 6) sulfotransferase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004264  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_004273 NP_004264 Q7LGC8 EC 2.8.2.17 Sulfotransfer_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC093690 AAH93690 Q7LGC8 EC 2.8.2.17
BC104856 AAI04857 Q7LGC8 EC 2.8.2.17
AB012192 BAA32576 Q7LGC8 EC 2.8.2.17
AB017915 BAA36348 Q7LGC8 EC 2.8.2.17

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHST3 NP_004264 M.musculus Chst3 53374 Gene Info NP_058083 87
R.norvegicus Chst3 84468   NP_445860 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)