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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. KCNN1, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
Sequence ID:NM_002248
RefSeqGene ID:NG_029893
Entrez Gene ID:3780
Ensembl ID:ENSG00000105642

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 18084644 - 18109393

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30915422Full LengthBC075037potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002239  

Protein Infomation

NM_002248 NP_002239 Q92952 CaMBD

Related Sequences

U69883 AAB09562 Q92952
BC075037 AAH75037 Q92952
AB198191 BAD86831 Q92952
AK298170 BAG60442 B4DP30

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens KCNN1 NP_002239 M.musculus Kcnn1 84036 Gene Info NP_115773 84
R.norvegicus LOC100360811 100360811   XP_002728431 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)