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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NR2E1, nuclear receptor subfamily 2, group E, member 1
Sequence ID:NM_003269
Entrez Gene ID:7101
Ensembl ID:ENSG00000112333

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 108487969 - 108508667

NM_003269 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1780108487214108487993
781926108492661108492806
9271014108496039108496126
10151250108497706108497941
12511397108499298108499444
13981494108501526108501622
14951644108502010108502159
16451750108502749108502854
17513257108508504108510010

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5242079Full LengthBC028031nuclear receptor subfamily 2, group E, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003260  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003269 NP_003260 Q9Y466 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
AF220532 AAG31945 Q9Y466
BC028031 AAH28031 Q9Y466
AF411525 AAL05871 Q9Y466
HQ692846 ADZ17357 B6ZGT9
AK131541 BAD18677 Q6ZMP8
AB307709 BAH02300 B6ZGT9
Y13276 CAA73725 Q9Y466

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NR2E1 NP_003260 M.musculus Nr2e1 21907 Gene Info NP_689415 99
D.melanogaster dsf 33823   NP_477140 54
C.elegans nhr-67 178024   NP_502094 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)