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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SACM1L, SAC1 suppressor of actin mutations 1-like (yeast)
Sequence ID:NM_014016
Entrez Gene ID:22908
Ensembl ID:ENSG00000211456

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 45730888 - 45786900

 Exon Info From UCSC:
NM_014016

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3049075Full LengthBC016559SAC1 suppressor of actin mutations 1-like (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054735  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014016 NP_054735 Q9NTJ5 Syja_N

Related Sequences

 
mRNAGenPeptSwissProt
BC016559 AAH16559 Q9NTJ5
AB020658 BAA74874 Q9NTJ5
AK291142 BAF83831 Q9NTJ5
AK126434 BAG54329 B3KX17
AK296421 BAG59083 B4DK71
AK301248 BAG62815 B4DVV3
AL136831 CAB66765 Q9NTJ5
CR749564 CAH18361 Q68D59
AM393061 CAL37939  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SACM1L NP_054735 M.musculus Sacm1l 83493 Gene Info NP_109617 95
R.norvegicus Sacm1l 116482   NP_446250 95
D.melanogaster Sac1 38137   NP_001189016 48
C.elegans F30A10.6 172778   NP_492518 48
A.gambiae AgaP_AGAP000891 1277408   XP_316868 45
N.crassa NCU00896 3880936   XP_964812 42
S.pombe SPBC19F5.03 2540393   NP_596541 39
S.cerevisiae SAC1 853668   NP_012710 38
A.thaliana RHD4 824309   NP_190714 36
A.thaliana ATSAC1B 836732   NP_201403 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)