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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPS29, ribosomal protein S29
Sequence ID:NM_001030001
NM_001032
Entrez Gene ID:6235
Ensembl ID:ENSG00000213741

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q

Chromosomal Position (from UCSC)

Chromosomal Position:14: 50050300 - 50053094

 Exon Info From UCSC:
NM_001030001
NM_001032

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3868721Full LengthBC035313ribosomal protein S29
4105424Full LengthBC015974ribosomal protein S29
5217083Full LengthBC032813ribosomal protein S29

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001023  NP_001025172  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001032 NP_001023 P62273 Ribosomal_S14
NM_001030001 NP_001025172   Ribosomal_S14

Related Sequences

 
mRNAGenPeptSwissProt
U14973 AAA85661 P62273
L31610 AAB27426 P62273
BC015974 AAH15974 P62273
BC032813 AAH32813 P62273
BC035313 AAH35313 P62273
DQ896685 ABM87684  
EU176460 ABW03911  
AB055780 BAB62874  
BX161511 CAD61948 Q86SZ0
XM_002343301 XP_002343342  
XM_002344775 XP_002344816  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPS29 NP_001025172 R.norvegicus Rps29 25348   NP_037008 98
M.musculus Rps29 20090 Gene Info NP_033119 98
M.musculus Gm14303 629957 Gene Info XP_900017 98
D.melanogaster RpS29 41200   NP_649946 77
A.gambiae AgaP_AGAP001595 1281578   XP_321509 75
C.elegans rps-29 175235   NP_497263 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)