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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CPQ, carboxypeptidase Q
Sequence ID:NM_016134
Entrez Gene ID:10404
Ensembl ID:ENSG00000104324

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 97797354 - 97847408

NM_016134 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11329765749897657629
1335999779709197797557
6008079784720097847407
80810159789202597892232
101611279797816297978273
112812199804163098041721
122014219807823698078437
142218959815524798155720

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4251802Full LengthBC020689plasma glutamate carboxypeptidase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057218  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016134 NP_057218 Q9Y646 Peptidase_M28

Related Sequences

 
mRNAGenPeptSwissProt
AF119386 AAD31418 Q9Y646
AF107833 AAD43213 Q9Y646
AF107834 AAD43214 Q9Y646
BC020689 AAH20689 Q9Y646
DQ893177 ABM84103  
DQ896759 ABM87758  
AK075132 BAC11423 Q9Y646
AK315447 BAG37835 Q9Y646
AK296013 BAG58784 B4DJC2
AK304008 BAG64924 B4E1W2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CPQ NP_057218 M.musculus Pgcp 54381 Gene Info NP_788262 88
R.norvegicus Pgcp 58952   NP_113828 88
A.gambiae AgaP_AGAP001264 1281913   XP_321888 49
A.gambiae AgaP_AGAP001262 1281914   XP_321889 47
A.gambiae AgaP_AGAP001263 3290451   XP_551581 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)