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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KDM4A, lysine (K)-specific demethylase 4A
Sequence ID:NM_014663
Entrez Gene ID:9682
Ensembl ID:ENSG00000066135

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 44115837 - 44171138

 Exon Info From UCSC:
NM_014663

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3138875Full LengthBC002558jumonji domain containing 2A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055478  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014663 NP_055478 O75164 JmjC
JmjN

Related Sequences

 
mRNAGenPeptSwissProt
BC002558 AAH02558 O75164
AB014577 BAA31652 O75164
AK294596 BAG57784 B4DGH3
AK300039 BAG61850 B4DT38

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KDM4A NP_055478 M.musculus Kdm4a 230674 Gene Info NP_001155295 94
R.norvegicus Kdm4a 313539   NP_001101436 93
C.elegans jmjd-2 175080   NP_496969 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)