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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TBC1D9B, TBC1 domain family, member 9B (with GRAM domain)
Sequence ID:NM_198868
NM_015043
Entrez Gene ID:23061
Ensembl ID:ENSG00000197226

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 179289746 - 179334856

 Exon Info From UCSC:
NM_198868
NM_015043

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129194Full LengthBC129994TBC1 domain family, member 9B (with GRAM domain)
6160217IncompleteBC080659TBC1 domain family, member 9B (with GRAM domain)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_942568  NP_055858  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015043 NP_055858   efhand
TBC
GRAM
NM_198868 NP_942568 Q66K14 efhand
TBC
GRAM

Related Sequences

 
mRNAGenPeptSwissProt
BC000701 AAH00701 Q9BW24
BC008919 AAH08919 Q66K14
BC080659 AAH80659 Q66K14
BC129994 AAI29995 A1L3A9
JF432540 ADZ15757  
AB014576 BAA31651 Q66K14
AK223509 BAD97229 Q66K14
AK001196 BAG50866 B3KM54
AK001473 BAG50919 B3KMA7
AK074791 BAG52002 B3KQE0
AK123874 BAG53977 B3KW15
AK304757 BAG65512 B4E3K0
AB449893 BAH16636 B9A6K8
BX641107 CAE46050 Q66K14

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBC1D9B NP_942568 M.musculus Tbc1d9b 76795 Gene Info NP_084021 93
R.norvegicus Tbc1d9b 360520   NP_001101744 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)