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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TSEN34, tRNA splicing endonuclease 34 homolog (S. cerevisiae)
Sequence ID:NM_001077446
NM_024075
RefSeqGene ID:NG_015810
Entrez Gene ID:79042
Ensembl ID:ENSG00000170892

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 54696168 - 54697521

 Exon Info From UCSC:
NM_001077446
NM_024075

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3342968Full LengthBC004530tRNA splicing endonuclease 34 homolog (S. cerevisiae)
4277870Full LengthBC020805tRNA splicing endonuclease 34 homolog (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001077446 NP_001070914      
NM_024075 NP_076980 Q9BSV6 EC 3.1.27.9  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC004530 AAH04530 Q9BSV6 EC 3.1.27.9
BC020805 AAH20805 Q9BSV6 EC 3.1.27.9
DQ893336 ABM84262    
DQ896652 ABM87651    
AK025929 BAB15284 Q9BSV6 EC 3.1.27.9
AK300054 BAG61863 B4DT51  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TSEN34 NP_001070914 R.norvegicus Tsen34 292534   NP_001006969 90
M.musculus Tsen34 66078 Gene Info NP_001157676 89
S.pombe sen34 2540591   NP_596163 32
N.crassa NCU08032 3878809   XP_962702 32
S.cerevisiae SEN34 851267   NP_009405 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)