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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FOXF1, forkhead box F1
Sequence ID:NM_001451
RefSeqGene ID:NG_016273
Entrez Gene ID:2294
Ensembl ID:ENSG00000103241

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PULMONARYHYPERTENSION, FAMILIAL PERSISTENT, OF THE NEWBORNCPS1

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 86544132 - 86546691

NM_001451 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110228654413286545153
102325618654653086548068

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30558276Full LengthBC089442forkhead box F1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001442  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001451 NP_001442 Q12946 Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
U13219 AAC50399 Q12946
BC089442 AAH89442 Q12946
EU832252 ACE86822  
EU832158 ACE87508  
AK314167 BAG36851 Q12946

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FOXF1 NP_001442 M.musculus Foxf1a 15227 Gene Info NP_034556 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)