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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NRIP1, nuclear receptor interacting protein 1
Sequence ID:NM_003489
Entrez Gene ID:8204
Ensembl ID:ENSG00000180530

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:21q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 16333562 - 16335745

NM_003489 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
172921633355516340846
729374151638666416386786
741674951641581516415894
749675561643706516437125

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3918685Full LengthBC040361nuclear receptor interacting protein 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003489 NP_003480 P48552  

Related Sequences

 
mRNAGenPeptSwissProt
BC040361 AAH40361 P48552
DQ891180 ABM82106  
DQ894362 ABM85288  
AK289786 BAF82475 A8K171
X84373 CAA59108 P48552

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NRIP1 NP_003480 R.norvegicus Nrip1 304157   NP_001094030 86
M.musculus Nrip1 268903 Gene Info NP_775616 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta