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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RGR, retinal G protein coupled receptor
Sequence ID:NM_001012720
NM_001012722
NM_002921
RefSeqGene ID:NG_009106
Entrez Gene ID:5995
Ensembl ID:ENSG00000148604

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
RETINITIS PIGMENTOSA 44 

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 86004841 - 86010668

 Exon Info From UCSC:
NM_001012720
NM_001012722
NM_002921

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4157985Full LengthBC011349retinal G protein coupled receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001012740  NP_002912  NP_001012738  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012720 NP_001012738 P47804 7tm_1
NM_001012722 NP_001012740   7tm_1
NM_002921 NP_002912   7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U14910 AAA56748 P47804
BC008094 AAH08094 Q96HT6
BC011349 AAH11349 P47804
DQ892074 ABM83000  
DQ895267 ABM86193  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RGR NP_001012738 M.musculus Rgr 57811 Gene Info NP_067315 81
R.norvegicus Rgr 306307   NP_001100769 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)