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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. S1PR1, sphingosine-1-phosphate receptor 1
Sequence ID:NM_001400
RefSeqGene ID:NG_016181
Entrez Gene ID:1901
Ensembl ID:ENSG00000170989

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 101704540 - 101705686

NM_001400 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1351101702304101702654
3523050101704377101707075

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4071217Full LengthBC018650sphingosine-1-phosphate receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001391  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001400 NP_001391 P21453 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
M31210 AAA52336 P21453
AF022137 AAC51905 P21453
AF233365 AAF43420 P21453
BC018650 AAH18650 P21453
AK312493 BAG35395 P21453
AK297005 BAG59541 B4DLH9
CR541786 CAG46585 P21453
CR542269 CAG47065 P21453

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens S1PR1 NP_001391 R.norvegicus S1pr1 29733   NP_058997 94
M.musculus S1pr1 13609 Gene Info NP_031927 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta