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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC35B1, solute carrier family 35, member B1
Sequence ID:NM_005827
Entrez Gene ID:10237
Ensembl ID:ENSG00000121073

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 47778648 - 47785133

NM_005827 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11834777868947778871
1843374778021947780372
3384444778054947780655
4455714778146147781587
5727294778248547782642
7307604778322747783257
7618914778356547783695
8929954778432647784429
99611864778509147785281

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3832062Full LengthBC011888solute carrier family 35, member B1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005818  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005827 NP_005818 P78383 UAA

Related Sequences

 
mRNAGenPeptSwissProt
BC011888 AAH11888 P78383
DQ893425 ABM84351  
EU176812 ABW03613  
D87989 BAA13525 P78383
AK293563 BAG57035 B4DEC4
AK296073 BAG58831 B4DJG9
BX641166 CAE46073 Q6MZG2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC35B1 NP_005818 M.musculus Slc35b1 110172 Gene Info NP_058032 96
R.norvegicus Slc35b1 287642   NP_954512 96
A.gambiae AgaP_AGAP001447 1281727   XP_321679 54
D.melanogaster CG5802 42510   NP_001097853 51
C.elegans Y111B2A.20 176690   NP_499652 48
S.pombe hut1 2541206   NP_595251 39
A.thaliana UTR3 837998   NP_563949 38
N.crassa NCU10721 5847392   XP_001728209 37
A.thaliana UTR1 814811   NP_565290 34
P.falciparum PF11_0141 810688   XP_001347812 34
S.cerevisiae HUT1 855832   NP_015080 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)