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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. ACTR1A, ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
Sequence ID:NM_005736
RefSeqGene ID:NG_011901
Entrez Gene ID:10121
Ensembl ID:ENSG00000138107

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 104240170 - 104262475

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3009822Full LengthBC026016ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
3347881Full LengthBC000693ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005727  

Protein Infomation

NM_005736 NP_005727 P61163 Actin

Related Sequences

BC000693 AAH00693 P61163
BC026016 AAH26016 P61163
DQ892689 ABM83615  
DQ895934 ABM86860  
AK312506 BAG35407 P61163
AK297362 BAG59809 B4DM97
AK297620 BAG59996 B4DMT4
AK302072 BAG63461 B4DXP9
X82206 CAA57690 P61163
Z14978 CAA78701 P61163
AM393135 CAL38013  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens ACTR1A NP_005727 M.musculus Actr1a 54130 Gene Info NP_058556 100
R.norvegicus Actr1a 294010   NP_001099834 100
D.melanogaster Arp87C 41566   NP_524331 79
A.gambiae AgaP_AGAP002127 1281358   XP_320908 78
C.elegans Y53F4B.22 175162   NP_497108 70
P.falciparum PFA_0190c 813175   XP_001350970 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)