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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CBFA2T2, core-binding factor, runt domain, alpha subunit 2; translocated to, 2
Sequence ID:NM_001032999
NM_001039709
NM_005093
NM_175864
Entrez Gene ID:9139
Ensembl ID:ENSG00000078699

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 32212395 - 32237836

 Exon Info From UCSC:
NM_001032999
NM_001039709
NM_005093

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3873865Full LengthBC040344core-binding factor, runt domain, alpha subunit 2; translocated to, 2
3836163IncompleteBC016298core-binding factor, runt domain, alpha subunit 2; translocated to, 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005084  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001032999 NP_001028171    
NM_001039709 NP_001034798    
NM_005093 NP_005084 O43439 zf-MYND
TAFH

Related Sequences

 
mRNAGenPeptSwissProt
AF039200 AAC17499 O43439
AF068266 AAC19378 O43439
AF013970 AAC39841 O43439
AF052210 AAC64699 O43439
AF052211 AAC64700 O60614
AF069747 AAD02825 O43439
BC015066 AAH15066 O43439
BC016298 AAH16298 O43439
BC040344 AAH40344 O43439
EU446928 ABZ92457  
JF432662 ADZ15879  
AB209306 BAD92543 Q59G03
AK314159 BAG36843 O43439
AK294168 BAG57490 B4DFM9
CR749462 CAH18294 Q68DC6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CBFA2T2 NP_001028171 M.musculus Cbfa2t2 12396 Gene Info NP_766448 97
R.norvegicus Cbfa2t2 296293   NP_001162014 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)