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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXD13, Homeobox D13
Sequence ID:NM_000523
RefSeqGene ID:NG_008137
Entrez Gene ID:3239
Ensembl ID:ENSG00000128714

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
BRACHYDACTYLY, TYPE D 
BRACHYDACTYLY, TYPE E 
BRACHYDACTYLY-SYNDACTYLY SYNDROME 
SYNDACTYLY, TYPE V 
SYNPOLYDACTYLY WITH FOOT ANOMALIES 
VACTERL ASSOCIATION 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_000523 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1868176957531176958398
8692327176959207176960665

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015923Full LengthBC148863homeobox D13
100015990BC152760homeobox D13

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000514  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000523 NP_000514 P35453 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC148863 AAI48864  
BC152760 AAI52761  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXD13 NP_000514 R.norvegicus Hoxd13 288154   NP_001099356 96
M.musculus Hoxd13 15433 Gene Info NP_032301 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)