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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CKLF, chemokine-like factor
Sequence ID:NM_001040138
NM_016326
NM_016951
NM_181640
NM_181641
NM_001040139
Entrez Gene ID:51192
Ensembl ID:ENSG00000217555

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 66586487 - 66599969

 Exon Info From UCSC:
NM_001040138
NM_016326
NM_016951
NM_181640
NM_181641

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3639550Full LengthBC004380chemokine-like factor
30333801Full LengthBC091478chemokine-like factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058647  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001040138 NP_001035228    
NM_016326 NP_057410    
NM_016951 NP_058647 Q9UBR5 MARVEL
NM_052999 NP_443725   MARVEL
NM_181268 NP_851785   MARVEL
NM_181269 NP_851786 Q8IZ96  
NM_181270 NP_851787    
NM_181271 NP_851788    
NM_181272 NP_851789    
NM_181283 NP_851800    
NM_181296 NP_851813    
NM_181640 NP_857591 Q5BJH6  
NM_181641 NP_857592    

Related Sequences

 
mRNAGenPeptSwissProt
AF096895 AAF06722 Q5BJH6
Q9UBR5
AF145216 AAF19350 Q9UBR5
AF135380 AAF19599 Q9UBR5
AF135381 AAF19600 Q9UBR5
AF057306 AAF21255 Q9UBR5
AF151058 AAF36144 Q9UBR5
BC004380 AAH04380 Q9UBR5
BC057852 AAH57852 Q8IZ96
BC091478 AAH91478 Q5BJH6
AF278576 AAK73015 Q8IZ96
AF278577 AAK73016 Q8IZ96
AY174118 AAN73227 Q8IZ96
AY174119 AAN73228 Q8IZ96
AY174120 AAN73229 Q8IZ96
AY174121 AAN73230 Q8IZ96
AY174122 AAN73231 Q8IZ96
AY174123 AAN73232 Q8IZ96
AY174124 AAN73233 Q8IZ96
AY174125 AAN73234 Q8IZ96
AY174126 AAN73235 Q8IZ96
AY174127 AAN73236 Q8IZ96
AY174128 AAN73237 Q8IZ96
AY174129 AAN73238 Q8IZ96
AY174130 AAN73239 Q8IZ96
AY174131 AAN73240 Q8IZ96
AY174132 AAN73241 Q8IZ96
AY174133 AAN73242 Q8IZ96
AY174134 AAN73243 Q8IZ96
AY174135 AAN73244 Q8IZ96
AY174136 AAN73245 Q8IZ96
AY174137 AAN73246 Q8IZ96
AY174138 AAN73247 Q8IZ96
AY358999 AAQ89358 Q9UBR5
DQ309766 ABC33727 Q8IZ96
DQ355985 ABC86984 Q0QJI3
DQ893388 ABM84314  
DQ896708 ABM87707  
AK290307 BAF82996 Q5BJH6
AK301240 BAG62809 I7GPS8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CKLF NP_058647 R.norvegicus Cklf 245978   NP_620811 63
M.musculus Cklf 75458 Gene Info NP_083571 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)