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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB13, RAB13, member RAS oncogene family
Sequence ID:NM_002870
Entrez Gene ID:5872
Ensembl ID:ENSG00000143545

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 153954574 - 153958712

NM_002870 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
59583153954127153954651
584637153954866153954919
638703153955010153955075
704793153955194153955283
794871153955694153955771
872932153955996153956056
933993153957196153957256
9941211153958588153958805

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3451945Full LengthBC000799RAB13, member RAS oncogene family
6193572Full LengthBC073168RAB13, member RAS oncogene family
3952196IncompleteBC009227RAB13, member RAS oncogene family
5516569IncompleteBC094846RAB13, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002861  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002870 NP_002861 P51153 Ras

Related Sequences

 
mRNAGenPeptSwissProt
BC000799 AAH00799 P51153
BC009227 AAH09227 P51153
BC073168 AAH73168 P51153
BC094846 AAH94846 Q504R6
AF498948 AAM21096 P51153
AY423722 AAS00485 P51153
BT019700 AAV38506 P51153
BT019701 AAV38507 P51153
AK291580 BAF84269 P51153
X75593 CAA53266 P51153
AM392651 CAL37529  
AM393152 CAL38030  
AM393265 CAL38143  
AM393465 CAL38342  
AM393739 CAL38614  
AM393810 CAL38685  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB13 NP_002861 R.norvegicus Rab13 81756   NP_112354 93
M.musculus Rab13 68328 Gene Info NP_080953 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)