Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OXA1L, oxidase (cytochrome c) assembly 1-like
Sequence ID:NM_005015
Entrez Gene ID:5018
Ensembl ID:ENSG00000155463

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 23235883 - 23237831

NM_005015 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12432323573023235972
2444052323645623236617
4066192323716623237379
6207632323899923239142
7648492323940123239486
85010142323966923239833
101511192324001323240117
112012822324022623240388
128313632324047623240556
136417192324064223240997

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40017377Full LengthBC112331oxidase (cytochrome c) assembly 1-like
2823880IncompleteBC001669oxidase (cytochrome c) assembly 1-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005006  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005015 NP_005006   60KD_IMP

Related Sequences

 
mRNAGenPeptSwissProt
BC001669 AAH01669 Q15070
BC112331 AAI12332 Q2M1J6
AK294849 BAG57953 B4DGZ2
AK298249 BAG60514 Q15070
X80695 CAA56712 Q15070
BX248001 CAD62333 Q15070
BX248295 CAD62623 Q15070

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OXA1L NP_005006 R.norvegicus Oxa1l 691393   NP_001162055 76
M.musculus Oxa1l 69089 Gene Info NP_081212 75
A.gambiae AgaP_AGAP005421 1276120   XP_315429 44
D.melanogaster CG6404 39222   NP_648417 39
S.cerevisiae OXA1 856898   NP_011081 35
A.thaliana OXA1L 819256   NP_182170 33
A.thaliana OXA1 836325   NP_201011 31
C.elegans C01A2.3 173207   NP_493356 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)