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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. JAM3, junctional adhesion molecule 3
Sequence ID:NM_001205329
NM_032801
RefSeqGene ID:NG_028348
Entrez Gene ID:83700
Ensembl ID:ENSG00000166086

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 133938978 - 134019076

Transcript StartTranscript EndChromosomal Start Chromosomal End
1235133938819133939053
236301134009745134009810
302415134010551134010664
416568134014135134014287
569771134014686134014888
772871134015840134015939
8721001134018441134018570
10021056134018658134018712
10573665134019040134021648

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4552285Full LengthBC012147junctional adhesion molecule 3
3875338IncompleteBC010690junctional adhesion molecule 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_116190  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001205329 NP_001192258    
NM_032801 NP_116190 Q9BX67 ig
I-set
V-set

Related Sequences

 
mRNAGenPeptSwissProt
BC010690 AAH10690 Q9BX67
BC012147 AAH12147 Q9BX67
AF356518 AAK27221 Q9BX67
AF448478 AAM20925 Q9BX67
AY358335 AAQ88701 Q9BX67
AK074769 BAC11195 Q9BX67
AK075309 BAC11538 Q9BX67
AK125071 BAG54131 Q9BX67
AJ344431 CAC69845 Q9BX67
AJ416101 CAC94776 Q9BX67

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens JAM3 NP_116190 M.musculus Jam3 83964 Gene Info NP_075766 86
R.norvegicus Jam3 315509   NP_001004269 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)