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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ASCL4, achaete-scute complex homolog 4 (Drosophila)
Sequence ID:NM_203436
Entrez Gene ID:121549
Ensembl ID:ENSG00000187855

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 108168161 - 108170415

NM_203436 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12259108168161108170419

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40114457Full LengthBC128211achaete-scute complex homolog 4 (Drosophila)
40114460Full LengthBC128212achaete-scute complex homolog 4 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_982260  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_203436 NP_982260 Q6XD76 HLH

Related Sequences

 
mRNAGenPeptSwissProt
BC128211 AAI28212 Q6XD76
BC128212 AAI28213 Q6XD76
AY238895 AAP69222 Q6XD76
BK000275 DAA01055 Q6XD76

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ASCL4 NP_982260 M.musculus Ascl4 67341 Gene Info NP_001157086 73
R.norvegicus Ascl4 299687   XP_235013 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)