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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LGSN, lengsin, lens protein with glutamine synthetase domain
Sequence ID:NM_001143940
NM_016571
Entrez Gene ID:51557
Ensembl ID:ENSG00000146166

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6pter-q22.33

Chromosomal Position (from UCSC)

Chromosomal Position:6: 63989559 - 64029882

 Exon Info From UCSC:
NM_001143940
NM_016571

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40146397Full LengthBC130366lengsin, lens protein with glutamine synthetase domain
40146399Full LengthBC130368lengsin, lens protein with glutamine synthetase domain

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001143940 NP_001137412    
NM_016571 NP_057655 Q5TDP6  

Related Sequences

 
mRNAGenPeptSwissProt
AF242388 AAF61255 Q5TDP6
BC130366 AAI30367 Q5TDP6
BC130368 AAI30369 Q5TDP6
DQ682605 ABG75902 Q5TDP6
DQ682606 ABG75903 Q5TDP6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LGSN NP_057655 M.musculus Lgsn 266744 Gene Info NP_705829 80
R.norvegicus Lgsn 316304   NP_852048 80
N.crassa NCU11239 3881213   XP_965073 26
A.thaliana AT3G53180 824484   NP_190886 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)