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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACSL6, acyl-CoA synthetase long-chain family member 6
Sequence ID:NM_001009185
NM_001205247
NM_001205248
NM_001205250
NM_001205251
NM_015256
RefSeqGene ID:NG_028290
Entrez Gene ID:23305
Ensembl ID:ENSG00000164398

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 131287296 - 131347315

 Exon Info From UCSC:
NM_001009185
NM_015256

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4830357Full LengthBC026161acyl-CoA synthetase long-chain family member 6
5270879Full LengthBC047453acyl-CoA synthetase long-chain family member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056071  NP_001009185  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001009185 NP_001009185   AMP-binding
NM_001205247 NP_001192176    
NM_001205248 NP_001192177    
NM_001205250 NP_001192179    
NM_001205251 NP_001192180    
NM_015256 NP_056071   AMP-binding

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF129166 AAD47199 Q9UKU0 EC 6.2.1.3
BC026161 AAH26161 Q4G191  
BC047453 AAH47453 Q9UKU0 EC 6.2.1.3
DQ083030 AAZ30713 Q9UKU0 EC 6.2.1.3
DQ083031 AAZ30714 Q9UKU0 EC 6.2.1.3
JF432422 ADZ15639    
AB020644 BAA74860 Q9UKU0 EC 6.2.1.3
AK314452 BAG37060 B2RB13  
AK122702 BAG53676 B3KV64  
AK294291 BAG57574 B4DFW3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACSL6 NP_056071 R.norvegicus Acsl6 117243   NP_570095 92
M.musculus Acsl6 216739 Gene Info NP_001028769 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)