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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UFL1, UFM1-specific ligase 1
Sequence ID:NM_015323
Entrez Gene ID:23376
Ensembl ID:ENSG00000014123

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q16.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 96969732 - 97003149

 Exon Info From UCSC:
NM_015323

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4825054Full LengthBC028608KIAA0776
5267922Full LengthBC036379KIAA0776
4426923IncompleteBC015377KIAA0776

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015323 NP_056138 O94874  

Related Sequences

 
mRNAGenPeptSwissProt
BC015377 AAH15377 O94874
BC028608 AAH28608 O94874
BC036379 AAH36379 O94874
AB018319 BAA34496 O94874
AK295934 BAG58719 O94874
AK316453 BAH14824 B7ZAY8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UFL1 NP_056138 M.musculus 1810074P20Rik 67490 Gene Info NP_080470 91
R.norvegicus Ufl1 313115   NP_001119751 91
D.melanogaster CG1104 40843   NP_649690 39
A.gambiae UFL1_ANOGA 1278223   XP_317778 37
A.thaliana AT3G46220 823767   NP_001190020 28
C.elegans C06G3.9 177471   NP_501090 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)