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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HTR2C, 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled
Sequence ID:NM_000868
NM_001256760
NM_001256761
RefSeqGene ID:NG_012082
Entrez Gene ID:3358
Ensembl ID:ENSG00000147246

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 113961345 - 114141978

Transcript StartTranscript EndChromosomal Start Chromosomal End
1582113818550113819131
583649113848272113848338
650763113961266113961379
7641077113965702113966015
10781278114082565114082765
12794751114141151114144623

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6519218Full LengthBC0955435-hydroxytryptamine (serotonin) receptor 2C
4821197IncompleteBC0286885-hydroxytryptamine (serotonin) receptor 2C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000859  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000868 NP_000859 P28335 7tm_1
NM_001256760 NP_001243689    
NM_001256761 NP_001243690    

Related Sequences

 
mRNAGenPeptSwissProt
M81778 AAA60317 P28335
U49516 AAB40898 P28335
AF208053 AAF35842 P28335
BC095543 AAH95543 P28335
AF498983 AAM21130 P28335
AK295753 BAG58583 B1AMW4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HTR2C NP_000859 M.musculus Htr2c 15560 Gene Info NP_032338 91
R.norvegicus Htr2c 25187   NP_036897 91
A.gambiae GPR5HT2A 1269329   XP_307953 39
C.elegans ser-1 181716   NP_001024728 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta