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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARHGAP39, Rho GTPase activating protein 39
Sequence ID:NM_025251
Entrez Gene ID:80728
Ensembl ID:ENSG00000147799

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 145754562 - 145838888

 Exon Info From UCSC:
NM_025251

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4150399IncompleteBC013071KIAA1688 protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079527  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025251 NP_079527   WW
RhoGAP
MyTH4

Related Sequences

 
mRNAGenPeptSwissProt
BC013071 AAH13071 Q6PJQ0
AB051475 BAB21779 Q9C0H5
AK092501 BAG52562 B3KS00
AK296353 BAG59035 B4DK23
AK303851 BAG64793 Q9C0H5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARHGAP39 NP_079527 M.musculus Arhgap39 223666 Gene Info NP_001161760 90
R.norvegicus Arhgap39 500901   NP_775145 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)