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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CALY, calcyon neuron-specific vesicular protein
Sequence ID:NM_015722
Entrez Gene ID:50632
Ensembl ID:ENSG00000130643

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 135138932 - 135150411

NM_015722 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1143135138927135139069
144465135139302135139623
466579135140381135140494
580690135141408135141518
691845135142358135142512
846983135150337135150474

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5734358Full LengthBC038978calcyon neuron-specific vesicular protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056537  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015722 NP_056537 Q9NYX4 Calcyon

Related Sequences

 
mRNAGenPeptSwissProt
AF225903 AAF34714 Q9NYX4
BC038978 AAH38978 Q9NYX4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CALY NP_056537 M.musculus Caly 68566 Gene Info NP_001177314 82
R.norvegicus Caly 192349   NP_620270 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)