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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CTSH, cathepsin H
Sequence ID:NM_004390
NM_148979
RefSeqGene ID:NG_009614
Entrez Gene ID:1512
Ensembl ID:ENSG00000103811

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 79214471 - 79237323


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3349910Full LengthBC002479cathepsin H

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004381  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_004390 NP_004381 P09668 EC 3.4.22.16 Peptidase_C1
Inhibitor_I29

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC002479 AAH02479 P09668 EC 3.4.22.16
AF426247 AAL23961 P09668 EC 3.4.22.16
AF426248 AAL23962    
DQ890683 ABM81609    
DQ893772 ABM84698    
D28436 BAA05802    
AK314698 BAG37247 P09668 EC 3.4.22.16
X07549 CAA30428 P09668 EC 3.4.22.16
X07549 CAA30429 P09668 EC 3.4.22.16
X16832 CAA34734 P09668 EC 3.4.22.16
Y18461 CAA77179 Q6LAF8  
CR456881 CAG33162 Q6IBC3  
CR749582 CAH18374 Q68D46  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTSH NP_004381 R.norvegicus Ctsh 25425   NP_037071 83
M.musculus Ctsh 13036 Gene Info NP_031827 83
A.thaliana AT3G45310 823669   NP_566880 54
A.thaliana ALP 836158   NP_568921 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)