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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CNFN, cornifelin
Sequence ID:NM_032488
Entrez Gene ID:84518
Ensembl ID:ENSG00000105427

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 42891170 - 42894439

NM_032488 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
192394289117342891393
2403764289149142891627
3774904289307742893190
4915434289439142894443

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40021735Full LengthBC101197cornifelin
40021738Full LengthBC101198cornifelin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115877  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032488 NP_115877 Q9BYD5 PLAC8

Related Sequences

 
mRNAGenPeptSwissProt
BC101197 AAI01198 Q9BYD5
BC101198 AAI01199 Q9BYD5
AB049591 BAB40656 Q9BYD5
AK312080 BAG35016 Q9BYD5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNFN NP_115877 M.musculus Cnfn 72383 Gene Info NP_082495 98
R.norvegicus Cnfn 365217   NP_001102379 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)