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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IMMT, Inner membrane protein, mitochondrial
Sequence ID:NM_006839
NM_001100169
NM_001100170
Entrez Gene ID:10989
Ensembl ID:ENSG00000132305

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p11.2|2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 86371054 - 86398438

 Exon Info From UCSC:
NM_006839
NM_001100169
NM_001100170

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2964676Full LengthBC002412inner membrane protein, mitochondrial (mitofilin)
4132331IncompleteBC005983inner membrane protein, mitochondrial (mitofilin)
5113784IncompleteBC027458inner membrane protein, mitochondrial (mitofilin)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001100169 NP_001093639    
NM_001100170 NP_001093640    
NM_006839 NP_006830 Q16891  

Related Sequences

 
mRNAGenPeptSwissProt
L42572 AAA85336 Q16891
AF148646 AAF73126 Q16891
BC002412 AAH02412 Q16891
BC005983 AAH05983 Q05DN3
BC027458 AAH27458 Q16891
BC107419 AAI07420 Q3B7X4
AY232292 AAP69987 Q16891
AY921637 AAX10024 Q16891
EU831559 ACE86478  
EU831472 ACE87159  
D21091 BAA04653 Q16891
D21092 BAA04654 Q16891
D21093 BAA04655 Q16891
D21094 BAA04656 Q16891
AK312251 BAG35183 Q16891
AK296676 BAG59273 B4DKR1
AK299014 BAG61094 B4DQY2
AK299596 BAG61528 B4DS66
AK300017 BAG61832 B4DT20
AK304197 BAG65077 B4E2B5
BX537369 CAD97612 Q16891
CR456793 CAG33074 Q16891
CR749590 CAH18389 Q16891

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IMMT NP_001093639 M.musculus Immt 76614 Gene Info NP_083949 90
R.norvegicus Immt 312444   NP_001030100 86
C.elegans immt-1 180566   NP_508475 33
D.melanogaster CG6455 42587   NP_524444 30
C.elegans immt-2 180122   NP_507241 30
A.gambiae AgaP_AGAP002364 1273598   XP_312591 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)