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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC7A1, Solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
Sequence ID:NM_003045
Entrez Gene ID:6541
Ensembl ID:ENSG00000139514

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 30088496 - 30127998

 Exon Info From UCSC:
NM_003045

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262451Full LengthBC069358solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
30340706Full LengthBC063303solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
40076678Full LengthBC115407solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
4179238IncompleteBC012895solute carrier family 7 (cationic amino acid transporter, y+ system), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003036  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003045 NP_003036 P30825 AA_permease

Related Sequences

 
mRNAGenPeptSwissProt
AF078107 AAC27721 P30825
BC063303 AAH63303 P30825
BC069358 AAH69358 P30825
BC115407 AAI15408 P30825
AK312818 BAG35675 B2R728
X57303 CAA40560 P30825
X59155 CAA41869 P30825

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC7A1 NP_003036 M.musculus Slc7a1 11987 Gene Info NP_031539 88
R.norvegicus Slc7a1 25648   NP_037243 88
A.thaliana CAT3 833664   NP_198510 40
A.thaliana CAT2 842170   NP_849822 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta