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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HDC, Histidine decarboxylase
Sequence ID:NM_002112
RefSeqGene ID:NG_027487
Entrez Gene ID:3067
Ensembl ID:ENSG00000140287

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q21-q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 50534145 - 50545502

 Exon Info From UCSC:
NM_002112

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052693Full LengthBC144173histidine decarboxylase
40146558Full LengthBC130527histidine decarboxylase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002103  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002112 NP_002103 P19113 EC 4.1.1.22 Pyridoxal_deC

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M60445 AAC41698 P19113 EC 4.1.1.22
BC130527 AAI30528 P19113 EC 4.1.1.22
BC144173 AAI44174 B7ZM01  
HQ258478 ADR83232    
X54297 CAA38196 P19113 EC 4.1.1.22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HDC NP_002103 M.musculus Hdc 15186 Gene Info NP_032256 88
R.norvegicus Hdc 24443   NP_058712 88
A.gambiae AgaP_AGAP009001 1279960   XP_319749 63
D.melanogaster Hdc 36076   NP_523679 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)