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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDH15, cadherin 15, type 1, M-cadherin (myotubule)
Sequence ID:NM_004933
RefSeqGene ID:NG_012055
Entrez Gene ID:1013
Ensembl ID:ENSG00000129910

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 89238174 - 89250013

 Exon Info From UCSC:
NM_004933

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3027886Full LengthBC008951cadherin 15, type 1, M-cadherin (myotubule)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004924  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004933 NP_004924 P55291 Cadherin
Cadherin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC008951 AAH08951 P55291
DQ893277 ABM84203  
DQ896608 ABM87607  
D83542 BAA12012 P55291

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDH15 NP_004924 M.musculus Cdh15 12555 Gene Info NP_031688 86
R.norvegicus Cdh15 361432   NP_997496 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)