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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. UBR4, ubiquitin protein ligase E3 component n-recognin 4
Sequence ID:NM_020765
RefSeqGene ID:NG_027669
Entrez Gene ID:23352
Ensembl ID:ENSG00000127481

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 19401007 - 19465587

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3506191IncompleteBC018694ubiquitin protein ligase E3 component n-recognin 4
3875762IncompleteBC063573ubiquitin protein ligase E3 component n-recognin 4
4301372IncompleteBC007962ubiquitin protein ligase E3 component n-recognin 4
4451241IncompleteBC073905ubiquitin protein ligase E3 component n-recognin 4
4691776IncompleteBC015865zinc finger, UBR1 type 1
4849875IncompleteBC096758ubiquitin protein ligase E3 component n-recognin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065816  

Protein Infomation

NM_020765 NP_065816 Q5T4S7 zf-UBR

Related Sequences

AF055010 AAC09360 Q5T4S7
BC007962 AAH07962 Q96HY5
BC018694 AAH18694 Q5T4S7
BC063573 AAH63573 Q5T4S7
BC073905 AAH73905 Q5T4S7
BC096758 AAH96758 Q5T4S7
AF348492 AAL83880 Q5T4S7
AB007931 BAA32307 Q5T4S7
AB037728 BAA92545 Q5T4S7
AK022322 BAB14011 Q5T4S7
AK125800 BAC86298 Q6ZUC7
AK001233 BAG50874 B3KM62
AK022573 BAG51094 B3KMT2
AK298314 BAG60568 B4DPF6
AK302623 BAG63867 B4DYV5
AL049972 CAB43227 Q5T4S7
AJ505016 CAD43719 Q5T4S7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens UBR4 NP_065816 M.musculus Ubr4 69116 Gene Info NP_001153791 97
R.norvegicus Ubr4 313658   NP_001034115 97
A.gambiae AgaP_AGAP001157 1282011   XP_322005 44
D.melanogaster poe 46243   NP_476986 43
C.elegans C44E4.1 172068   NP_491407 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)