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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARL13A, ADP-ribosylation factor-like 13A
Sequence ID:NM_001012990
NM_001162490
NM_001162491
Entrez Gene ID:392509
Ensembl ID:ENSG00000174225

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 100224696 - 100245517

 Exon Info From UCSC:
NM_001012990
NM_001162490
NM_001162491

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021676Full LengthBC140808ADP-ribosylation factor-like 13A
9053134Full LengthBC144603ADP-ribosylation factor-like 13A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001013008  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012990 NP_001013008 Q5H913 Arf
NM_001162490 NP_001155962    
NM_001162491 NP_001155963    

Related Sequences

 
mRNAGenPeptSwissProt
BC140808 AAI40809 Q5H913
BC144603 AAI44604 Q5H913
AK301813 BAG63262 Q5H913

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARL13A NP_001013008 R.norvegicus Arl13a 501617   NP_001019537 68
M.musculus Arl13a 74448 Gene Info NP_083223 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)