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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COLQ, collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
Sequence ID:NM_005677
NM_080538
NM_080539
NM_080540
NM_080541
NM_080542
NM_080543
NM_080544
RefSeqGene ID:NG_009032
Entrez Gene ID:8292
Ensembl ID:ENSG00000206561

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ENDPLATE ACETYLCHOLINESTERASE DEFICIENCY 

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 15491653 - 15563258

 Exon Info From UCSC:
NM_005677
NM_080538
NM_080539

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30915325Full LengthBC074829collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
30915542Full LengthBC074828collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_536799  NP_536800  NP_005668  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005677 NP_005668 Q9Y215 Collagen
NM_080538 NP_536799   Collagen
NM_080539 NP_536800   Collagen

Related Sequences

 
mRNAGenPeptSwissProt
AF057036 AAC39927 Q9Y215
BC074828 AAH74828 Q9Y215
BC074829 AAH74829 Q9Y215
AY150334 AAO06814 Q9Y215
AY150335 AAO06815  
AY150336 AAO06816 Q9Y215
AY150337 AAO06817 Q9Y215
AY150338 AAO06818 Q9Y215
AY150339 AAO06819 Q9Y215
AK289688 BAF82377 A8K0X3
AK128401 BAG54671 Q9Y215
AJ225895 CAA12648 Q9Y215

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COLQ NP_005668 M.musculus Colq 382864 Gene Info NP_034067 91
R.norvegicus Colq 29755   NP_062147 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)