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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NEGR1, Neuronal growth regulator 1
Sequence ID:NM_173808
Entrez Gene ID:257194
Ensembl ID:ENSG00000172260

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 71871817 - 72748184

NM_173808 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
246297186862571873252
463047817205849972058650
478249027207670872076828
490350347216369072163821
503551607224185472241979
516153937240076172400993
539456697274800172748276

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5576828Full LengthBC036771neuronal growth regulator 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_776169  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173808 NP_776169 Q7Z3B1 ig
I-set

Related Sequences

 
mRNAGenPeptSwissProt
BC036771 AAH36771 Q8N440
AK092307 BAC03858 Q7Z3B1
AK295481 BAG58406 B4DI94
BX538014 CAD97961 Q7Z3B1
CR749215 CAH18072 Q68DZ8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NEGR1 NP_776169 R.norvegicus Negr1 59318   NP_067714 96
M.musculus Negr1 320840 Gene Info NP_001034183 96
A.gambiae AgaP_AGAP010422 1272626   XP_311526 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)