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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCBP2, chemokine binding protein 2
Sequence ID:NM_001296
Entrez Gene ID:1238
Ensembl ID:ENSG00000144648

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 42850967 - 42907149

NM_001296 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1614285096342851023
621424286112242861202
14329594290595742908773

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3451472Full LengthBC020558chemokine binding protein 2
3958671Full LengthBC011631chemokine binding protein 2
3959017Full LengthBC008816chemokine binding protein 2
8069135Full LengthBC101629chemokine binding protein 2
8327513Full LengthBC112045chemokine binding protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001287  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001296 NP_001287 O00590 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U94888 AAB97728 O00590
BC008816 AAH08816 O00590
BC011631 AAH11631 O00590
BC020558 AAH20558 O00590
BC101629 AAI01630 O00590
BC112045 AAI12046 O00590
BT006800 AAP35446 O00590
EU832737 ACE87069  
AK313561 BAG36335 O00590
Y12815 CAA73346 O00590

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCBP2 NP_001287 R.norvegicus Ccbp2 140473   NP_511176 73
M.musculus Ccbp2 59289 Gene Info NP_067622 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)