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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SIM2, Single-minded homolog 2 (Drosophila)
Sequence ID:NM_005069
NM_009586
RefSeqGene ID:NG_029519
Entrez Gene ID:6493
Ensembl ID:ENSG00000159263

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 38081480 - 38118172

 Exon Info From UCSC:
NM_005069
NM_009586

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40007501Full LengthBC110444single-minded homolog 2 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005060  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005069 NP_005060 Q14190 PAS
SIM_C
PAS_3
NM_009586 NP_033664    

Related Sequences

 
mRNAGenPeptSwissProt
U80456 AAB62396 Q14190
U80457 AAB62397 Q14190
BC110444 AAI10445 Q14190
AJ001858 CAA05055 Q14190
X84790 CAA59261 Q14190

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SIM2 NP_005060 M.musculus Sim2 20465 Gene Info NP_035507 92
R.norvegicus Sim2 304071   NP_001100578 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)