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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CTIF, CBP80/20-dependent translation initiation factor
Sequence ID:NM_001142397
NM_014772
Entrez Gene ID:9811
Ensembl ID:ENSG00000134030

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 46065426 - 46389584

 Exon Info From UCSC:
NM_001142397
NM_014772

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5928756Full LengthBC042146KIAA0427

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055587  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142397 NP_001135869    
NM_014772 NP_055587 O43310 MIF4G

Related Sequences

 
mRNAGenPeptSwissProt
BC042146 AAH42146 O43310
AB007887 BAA24857 O43310
AK095970 BAG53180 O43310

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTIF NP_001135869 M.musculus Ctif 269037 Gene Info NP_958742 94
R.norvegicus Ctif 364900   NP_001102361 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)